Cropper is a GUI application for viewing and handling Manhattan Plots. The user can zoom, select and crop Manhattan Plots and generate output both in the graphical and numerical format.
SUMMARY OF MAIN FEATURES
1. Input files need to have chromsome, position and p-value fields.
2. Zoom, crop, region color, point or line representation, region save (both graphics and numerical files), all chromosome view, single chromosome view, informatgive graphical interface.
3. Can be compailed for all major platforms.
A scientific article has been written for publication in BMC Bioinformatics to demonstrate the utility of Cropper together with Manhattan Harvester.
DOWNLOAD WITH INSTRUCTIONS
CentOS 64 bit version: download
CentOS 64 bit static version: download
MacOS version: download
Ubuntu 32 bit version: download
Windows static version: download
* You can compile Cropper yourself from the source code:
Source code is available HERE
Cropper was designed to be intuitive to use. Detailed instructions are downloaded together with the application.
Please contact us if you have any questions or suggestions:
toomas <dot> haller <at> ut <dot> ee
toomashaller <at> gmail <dot> com